Login Name Tty Idle Login Time Office Office Phone abrown1 Alan Brown PI Venki Ra tty1 20d Feb 27 11:16 (:0) abrown1 Alan Brown PI Venki Ra pts/0 7d Feb 27 11:16 (:0.0) abrown1 Alan Brown PI Venki Ra pts/1 7d Feb 27 11:25 (:0.0) abrown1 Alan Brown PI Venki Ra pts/2 7d Feb 27 11:41 (:0.0) jllacer Jose Llacer PI Venki R pts/3 5d Feb 27 14:27 (:1.0) jllacer Jose Llacer PI Venki R pts/5 5d Feb 28 15:52 (:1.0) jllacer Jose Llacer PI Venki R pts/6 4d Feb 27 14:42 (:1.0) jllacer Jose Llacer PI Venki R pts/7 4d Feb 27 14:44 (:1.0) jllacer Jose Llacer PI Venki R pts/8 4d Mar 1 11:42 (:1.0) jllacer Jose Llacer PI Venki R pts/9 4d Mar 1 14:25 (:1.0) jllacer Jose Llacer PI Venki R pts/10 5d Mar 1 14:29 (:1.0) jllacer Jose Llacer PI Venki R tty7 20d Feb 27 14:26 (:1) pemsley Paul Emsley PI Garib M pts/12 4d Mar 1 21:37 (hal.lmb.internal) pemsley Paul Emsley PI Garib M pts/11 4d Mar 1 18:34 (pcterm19.lmb.internal) pemsley Paul Emsley PI Garib M pts/4 4d Mar 1 18:32 (pcterm19.lmb.internal) pemsley Paul Emsley PI Garib M pts/13 2 Mar 6 14:43 (hal.lmb.internal) From tar file: /lmb/home/pemsley/autobuild/building/sources/coot-0.8.8-pre-revision-6656.tar.gz building in: /lmb/home/pemsley/autobuild/building/lg19.lmb.internal_2017-03-06__T14_52_18/coot-0.8.8-pre CFLAGS: CXXFLAGS: -g -O CPPFLAGS: LDFLAGS: using this guile: /lmb/home/pemsley/autobuild/Linux-lg19.lmb.internal-pre-release-gtk2-python/bin/guile ./configure --prefix=/lmb/home/pemsley/autobuild/Linux-lg19.lmb.internal-pre-release-gtk2-python --with-fftw-prefix=/lmb/home/pemsley/autobuild/Linux-lg19.lmb.internal-pre-release-gtk2-python --with-goocanvas-prefix=/lmb/home/pemsley/autobuild/Linux-lg19.lmb.internal-pre-release-gtk2-python --with-glut-prefix=/lmb/home/pemsley/autobuild/Linux-lg19.lmb.internal-pre-release-gtk2-python COOT_BUILD_INFO_STRING=built by: Paul Emsley PI Garib Murshudov added 28092012 build-host: lg19.lmb.internal on: Mon 06 Mar 1455.03 GMT 2017 --with-guile --with-guile-gtk --with-guile-gtk-prefix=/lmb/home/pemsley/autobuild/Linux-lg19.lmb.internal-pre-release-gtk2-python --with-python --with-pygtk --disable-shared checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... /bin/mkdir -p checking for gawk... gawk checking whether make sets $(MAKE)... yes checking for style of include used by make... GNU checking for gcc... gcc checking for C compiler default output file name... a.out checking whether the C compiler works... yes checking whether we are cross compiling... no checking for suffix of executables... checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether gcc accepts -g... yes checking for gcc option to accept ISO C89... none needed checking dependency style of gcc... gcc3 checking for library containing strerror... none required checking for gcc... (cached) gcc checking whether we are using the GNU C compiler... (cached) yes checking whether gcc accepts -g... (cached) yes checking for gcc option to accept ISO C89... (cached) none needed checking dependency style of gcc... (cached) gcc3 checking how to run the C preprocessor... gcc -E checking for grep that handles long lines and -e... /bin/grep checking for egrep... /bin/grep -E checking for ANSI C header files... yes checking for g++... g++ checking whether we are using the GNU C++ compiler... yes checking whether g++ accepts -g... yes checking dependency style of g++... gcc3 checking build system type... x86_64-unknown-linux-gnu checking host system type... x86_64-unknown-linux-gnu checking for a sed that does not truncate output... /bin/sed checking for fgrep... /bin/grep -F checking for ld used by gcc... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B checking the name lister (/usr/bin/nm -B) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 3458764513820540925 checking whether the shell understands some XSI constructs... yes checking whether the shell understands "+="... yes checking for /usr/bin/ld option to reload object files... -r checking for objdump... objdump checking how to recognize dependent libraries... pass_all checking for ar... ar checking for strip... strip checking for ranlib... ranlib checking command to parse /usr/bin/nm -B output from gcc object... ok checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking whether we are using the GNU C++ compiler... (cached) yes checking whether g++ accepts -g... (cached) yes checking dependency style of g++... (cached) gcc3 checking how to run the C++ preprocessor... g++ -E checking for objdir... .libs checking if gcc supports -fno-rtti -fno-exceptions... no checking for gcc option to produce PIC... -fPIC -DPIC checking if gcc PIC flag -fPIC -DPIC works... yes checking if gcc static flag -static works... yes checking if gcc supports -c -o file.o... yes checking if gcc supports -c -o file.o... (cached) yes checking whether the gcc linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... no checking whether to build static libraries... yes checking for ld used by g++... /usr/bin/ld -m elf_x86_64 checking if the linker (/usr/bin/ld -m elf_x86_64) is GNU ld... yes checking whether the g++ linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking for g++ option to produce PIC... -fPIC -DPIC checking if g++ PIC flag -fPIC -DPIC works... yes checking if g++ static flag -static works... yes checking if g++ supports -c -o file.o... yes checking if g++ supports -c -o file.o... (cached) yes checking whether the g++ linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking which libtool initialization strategy to adopt... AC-PROG-LIBTOOL checking what warning flags to pass to the C compiler... -Wall -Wunused checking what language compliance flags to pass to the C compiler... checking what warning flags to pass to the C++ compiler... -Wall -Wno-unused checking what language compliance flags to pass to the C++ compiler... checking sys/stdtypes.h usability... no checking sys/stdtypes.h presence... no checking for sys/stdtypes.h... no checking for OpenMP flag of C compiler... -fopenmp checking for pkg-config... /usr/bin/pkg-config checking pkg-config is at least version 0.9.0... yes checking for GLIB... yes checking if this is MINGW on Windows... no checking for SQLite3... yes checking for mmdb2... yes checking for ssm... yes no checking for prefixed single-precision FFTW2 (sfftw.h)... yes checking for Clipper... yes Congratulations, you are using Guile checking for guile... /lmb/home/pemsley/autobuild/Linux-lg19.lmb.internal-pre-release-gtk2-python/bin/guile checking for guile-config... /lmb/home/pemsley/autobuild/Linux-lg19.lmb.internal-pre-release-gtk2-python/bin/guile-config checking for guile-tools... /lmb/home/pemsley/autobuild/Linux-lg19.lmb.internal-pre-release-gtk2-python/bin/guile-tools checking libguile compile flags... -I/lmb/home/pemsley/autobuild/Linux-lg19.lmb.internal-pre-release-gtk2-python/include -P -pthread checking libguile link flags... -P -pthread -L/lmb/home/pemsley/autobuild/Linux-lg19.lmb.internal-pre-release-gtk2-python/lib -lguile -lltdl -L/lmb/home/pemsley/autobuild/Linux-lg19.lmb.internal-pre-release-gtk2-python/lib -lgmp -lcrypt -lm -lltdl checking for Guile-Lib... yes checking for guile-gui... yes checking GUILE_VERSION: 1.8 checking for gsl-config... /lmb/home/pemsley/autobuild/Linux-lg19.lmb.internal-pre-release-gtk2-python/bin/gsl-config checking for GSL - version >= 1.3... yes checking for GTK... yes checking for GNOME_CANVAS... yes checking for pkg-config... /usr/bin/pkg-config checking for GtkGLExt - version >= 1.0.0... yes (version 1.2.0) checking for glLineWidth in -lGL... yes checking for GLUT... yes checking for Python... checking Python.h usability... yes checking Python.h presence... yes checking for Python.h... yes Cool, using Python checking for PYGTK... yes Good we have pygtk checking for python version... 2.7 checking for python platform... linux2 checking for python script directory... ${prefix}/lib/python2.7/site-packages checking for python extension module directory... ${exec_prefix}/lib/python2.7/site-packages checking for guile-gtk... /lmb/home/pemsley/autobuild/Linux-lg19.lmb.internal-pre-release-gtk2-python checking for boostlib >= 1.20.0... yes checking for python2.7... /lmb/home/pemsley/autobuild/Linux-lg19.lmb.internal-pre-release-gtk2-python/bin/python2.7 checking for a version of Python >= '2.1.0'... yes checking for the distutils Python package... yes checking for Python include path... -I/lmb/home/pemsley/autobuild/Linux-lg19.lmb.internal-pre-release-gtk2-python/include/python2.7 checking for Python library path... -L/lmb/home/pemsley/autobuild/Linux-lg19.lmb.internal-pre-release-gtk2-python/lib -lpython2.7 checking for Python site-packages path... /lmb/home/pemsley/autobuild/Linux-lg19.lmb.internal-pre-release-gtk2-python/lib/python2.7/site-packages checking python extra libraries... -lpthread -ldl -lutil -lm checking python extra linking flags... -Xlinker -export-dynamic checking consistency of all components of python development environment... yes checking whether the Boost::Python library is available... yes checking for exit in -lboost_python-mt... yes checking libglade... yes checking for Goocanvas... yes Not using MySQL database checking for curl >= 7.9.7... 7.32.0 checking build type... Linux-x86_64-scientific-linux-6.7-python-gtk2 configure: creating ./config.status config.status: creating Makefile config.status: creating macros/Makefile config.status: creating pdb-templates/Makefile config.status: creating scheme/Makefile config.status: creating python/Makefile config.status: creating compat/Makefile config.status: creating utils/Makefile config.status: creating coot-utils/Makefile config.status: creating protein_db/Makefile config.status: creating ccp4mg-utils/Makefile config.status: creating coords/Makefile config.status: creating db-main/Makefile config.status: creating density-contour/Makefile config.status: creating surface/Makefile config.status: creating coot-surface/Makefile config.status: creating angles/Makefile config.status: creating mini-mol/Makefile config.status: creating skeleton/Makefile config.status: creating ligand/Makefile config.status: creating geometry/Makefile config.status: creating ideal/Makefile config.status: creating build/Makefile config.status: creating analysis/Makefile config.status: creating high-res/Makefile config.status: creating tw/Makefile config.status: creating cootaneer/Makefile config.status: creating cootilus/Makefile config.status: creating greg-tests/Makefile config.status: creating python-tests/Makefile config.status: creating lidia-core/Makefile config.status: creating libgtkgraph/Makefile config.status: creating goograph/Makefile config.status: creating lbg/Makefile config.status: creating doc/Makefile config.status: creating src/Makefile config.status: creating src/coot config.status: creating python/coot_load_modules.py config.status: creating data/Makefile config.status: creating pixmaps/Makefile config.status: creating pixmaps/icons/Makefile config.status: creating rama-data/Makefile config.status: creating man/Makefile config.status: creating pyrogen/Makefile config.status: creating pyrogen/pyrogen config.status: creating auxil/Makefile config.status: creating auxil/catcheck/Makefile config.status: creating auxil/rama/Makefile config.status: creating auxil/sec-str/Makefile config.status: creating auxil/strand-analysis/Makefile config.status: creating auxil/vectors/Makefile config.status: creating rcrane/Makefile config.status: executing depfiles commands config.status: executing libtool commands Making all in auxil make[1]: Entering directory `/lmb/home/pemsley/autobuild/building/lg19.lmb.internal_2017-03-06__T14_52_18/coot-0.8.8-pre/auxil' Making all in catcheck make[2]: Entering directory `/lmb/home/pemsley/autobuild/building/lg19.lmb.internal_2017-03-06__T14_52_18/coot-0.8.8-pre/auxil/catcheck' make[2]: Nothing to be done for `all'. make[2]: Leaving directory `/lmb/home/pemsley/autobuild/building/lg19.lmb.internal_2017-03-06__T14_52_18/coot-0.8.8-pre/auxil/catcheck' Making all in rama make[2]: Entering directory `/lmb/home/pemsley/autobuild/building/lg19.lmb.internal_2017-03-06__T14_52_18/coot-0.8.8-pre/auxil/rama' make[2]: Nothing to be done for `all'. make[2]: Leaving directory `/lmb/home/pemsley/autobuild/building/lg19.lmb.internal_2017-03-06__T14_52_18/coot-0.8.8-pre/auxil/rama' Making all in sec-str make[2]: Entering directory `/lmb/home/pemsley/autobuild/building/lg19.lmb.internal_2017-03-06__T14_52_18/coot-0.8.8-pre/auxil/sec-str' make[2]: Nothing to be done for `all'. make[2]: Leaving directory `/lmb/home/pemsley/autobuild/building/lg19.lmb.internal_2017-03-06__T14_52_18/coot-0.8.8-pre/auxil/sec-str' Making all in strand-analysis make[2]: Entering directory `/lmb/home/pemsley/autobuild/building/lg19.lmb.internal_2017-03-06__T14_52_18/coot-0.8.8-pre/auxil/strand-analysis' make[2]: Nothing to be done for `all'. make[2]: Leaving directory `/lmb/home/pemsley/autobuild/building/lg19.lmb.internal_2017-03-06__T14_52_18/coot-0.8.8-pre/auxil/strand-analysis' Making all in vectors make[2]: Entering directory `/lmb/home/pemsley/autobuild/building/lg19.lmb.internal_2017-03-06__T14_52_18/coot-0.8.8-pre/auxil/vectors' make[2]: Nothing to be done for `all'. make[2]: Leaving directory `/lmb/home/pemsley/autobuild/building/lg19.lmb.internal_2017-03-06__T14_52_18/coot-0.8.8-pre/auxil/vectors' make[2]: Entering directory `/lmb/home/pemsley/autobuild/building/lg19.lmb.internal_2017-03-06__T14_52_18/coot-0.8.8-pre/auxil' make[2]: Nothing to be done for `all-am'. make[2]: Leaving directory `/lmb/home/pemsley/autobuild/building/lg19.lmb.internal_2017-03-06__T14_52_18/coot-0.8.8-pre/auxil' make[1]: Leaving directory `/lmb/home/pemsley/autobuild/building/lg19.lmb.internal_2017-03-06__T14_52_18/coot-0.8.8-pre/auxil' Making all in scheme make[1]: Entering directory `/lmb/home/pemsley/autobuild/building/lg19.lmb.internal_2017-03-06__T14_52_18/coot-0.8.8-pre/scheme' make[1]: Nothing to be done for `all'. make[1]: Leaving directory `/lmb/home/pemsley/autobuild/building/lg19.lmb.internal_2017-03-06__T14_52_18/coot-0.8.8-pre/scheme' Making all in python make[1]: Entering directory `/lmb/home/pemsley/autobuild/building/lg19.lmb.internal_2017-03-06__T14_52_18/coot-0.8.8-pre/python' make[1]: Nothing to be done for `all'. make[1]: Leaving directory `/lmb/home/pemsley/autobuild/building/lg19.lmb.internal_2017-03-06__T14_52_18/coot-0.8.8-pre/python' Making all in pdb-templates make[1]: Entering directory `/lmb/home/pemsley/autobuild/building/lg19.lmb.internal_2017-03-06__T14_52_18/coot-0.8.8-pre/pdb-templates' make[1]: Nothing to be done for `all'. make[1]: Leaving directory `/lmb/home/pemsley/autobuild/building/lg19.lmb.internal_2017-03-06__T14_52_18/coot-0.8.8-pre/pdb-templates' Making all in macros make[1]: Entering directory `/lmb/home/pemsley/autobuild/building/lg19.lmb.internal_2017-03-06__T14_52_18/coot-0.8.8-pre/macros' make[1]: Nothing to be done for `all'. make[1]: Leaving directory `/lmb/home/pemsley/autobuild/building/lg19.lmb.internal_2017-03-06__T14_52_18/coot-0.8.8-pre/macros' Making all in compat make[1]: Entering directory `/lmb/home/pemsley/autobuild/building/lg19.lmb.internal_2017-03-06__T14_52_18/coot-0.8.8-pre/compat' /bin/sh ../libtool --tag=CC --mode=compile gcc -DPACKAGE_NAME=\"coot\" -DPACKAGE_TARNAME=\"coot\" -DPACKAGE_VERSION=\"0.8.8-pre\" -DPACKAGE_STRING=\"coot\ 0.8.8-pre\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"coot\" -DVERSION=\"0.8.8-pre\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_OPENMP=1 -DFFTW2_PREFIX_S=1 -DHAVE_BOOST=/\*\*/ -DHAVE_PYTHON=\"2.7\" -DHAVE_BOOST_PYTHON=/\*\*/ -I. -I/lmb/home/pemsley/autobuild/Linux-lg19.lmb.internal-pre-release-gtk2-python/include -g -O2 -Wall -Wunused -MT getopt.lo -MD -MP -MF .deps/getopt.Tpo -c -o getopt.lo getopt.c /bin/sh ../libtool --tag=CC --mode=compile gcc -DPACKAGE_NAME=\"coot\" -DPACKAGE_TARNAME=\"coot\" -DPACKAGE_VERSION=\"0.8.8-pre\" -DPACKAGE_STRING=\"coot\ 0.8.8-pre\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"coot\" -DVERSION=\"0.8.8-pre\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_OPENMP=1 -DFFTW2_PREFIX_S=1 -DHAVE_BOOST=/\*\*/ -DHAVE_PYTHON=\"2.7\" -DHAVE_BOOST_PYTHON=/\*\*/ -I. -I/lmb/home/pemsley/autobuild/Linux-lg19.lmb.internal-pre-release-gtk2-python/include -g -O2 -Wall -Wunused -MT getopt1.lo -MD -MP -MF .deps/getopt1.Tpo -c -o getopt1.lo getopt1.c libtool: compile: gcc -DPACKAGE_NAME=\"coot\" -DPACKAGE_TARNAME=\"coot\" -DPACKAGE_VERSION=\"0.8.8-pre\" "-DPACKAGE_STRING=\"coot 0.8.8-pre\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"coot\" -DVERSION=\"0.8.8-pre\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_OPENMP=1 -DFFTW2_PREFIX_S=1 "-DHAVE_BOOST=/**/" -DHAVE_PYTHON=\"2.7\" "-DHAVE_BOOST_PYTHON=/**/" -I. -I/lmb/home/pemsley/autobuild/Linux-lg19.lmb.internal-pre-release-gtk2-python/include -g -O2 -Wall -Wunused -MT getopt1.lo -MD -MP -MF .deps/getopt1.Tpo -c getopt1.c -o getopt1.o libtool: compile: gcc -DPACKAGE_NAME=\"coot\" -DPACKAGE_TARNAME=\"coot\" -DPACKAGE_VERSION=\"0.8.8-pre\" "-DPACKAGE_STRING=\"coot 0.8.8-pre\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"coot\" -DVERSION=\"0.8.8-pre\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_OPENMP=1 -DFFTW2_PREFIX_S=1 "-DHAVE_BOOST=/**/" -DHAVE_PYTHON=\"2.7\" "-DHAVE_BOOST_PYTHON=/**/" -I. -I/lmb/home/pemsley/autobuild/Linux-lg19.lmb.internal-pre-release-gtk2-python/include -g -O2 -Wall -Wunused -MT getopt.lo -MD -MP -MF .deps/getopt.Tpo -c getopt.c -o getopt.o mv -f .deps/getopt.Tpo .deps/getopt.Plo mv -f .deps/getopt1.Tpo .deps/getopt1.Plo /bin/sh ../libtool --tag=CC --mode=link gcc -g -O2 -Wall -Wunused -o libcoot-compat.la -rpath /lmb/home/pemsley/autobuild/Linux-lg19.lmb.internal-pre-release-gtk2-python/lib getopt.lo getopt1.lo libtool: link: ar cru .libs/libcoot-compat.a getopt.o getopt1.o libtool: link: ranlib .libs/libcoot-compat.a libtool: link: ( cd ".libs" && rm -f "libcoot-compat.la" && ln -s "../libcoot-compat.la" "libcoot-compat.la" ) make[1]: Leaving directory `/lmb/home/pemsley/autobuild/building/lg19.lmb.internal_2017-03-06__T14_52_18/coot-0.8.8-pre/compat' Making all in utils make[1]: Entering directory `/lmb/home/pemsley/autobuild/building/lg19.lmb.internal_2017-03-06__T14_52_18/coot-0.8.8-pre/utils' /bin/sh ../libtool --tag=CXX --mode=compile g++ -DPACKAGE_NAME=\"coot\" -DPACKAGE_TARNAME=\"coot\" -DPACKAGE_VERSION=\"0.8.8-pre\" -DPACKAGE_STRING=\"coot\ 0.8.8-pre\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"coot\" -DVERSION=\"0.8.8-pre\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_OPENMP=1 -DFFTW2_PREFIX_S=1 -DHAVE_BOOST=/\*\*/ -DHAVE_PYTHON=\"2.7\" -DHAVE_BOOST_PYTHON=/\*\*/ -I. -I.. -I/lmb/home/pemsley/autobuild/Linux-lg19.lmb.internal-pre-release-gtk2-python/include -DPKGDATADIR='"/lmb/home/pemsley/autobuild/Linux-lg19.lmb.internal-pre-release-gtk2-python/share/coot"' -g -O -Wall -Wno-unused -MT coot-utils.lo -MD -MP -MF .deps/coot-utils.Tpo -c -o coot-utils.lo coot-utils.cc /bin/sh ../libtool --tag=CXX --mode=compile g++ -DPACKAGE_NAME=\"coot\" -DPACKAGE_TARNAME=\"coot\" -DPACKAGE_VERSION=\"0.8.8-pre\" -DPACKAGE_STRING=\"coot\ 0.8.8-pre\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"coot\" -DVERSION=\"0.8.8-pre\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_OPENMP=1 -DFFTW2_PREFIX_S=1 -DHAVE_BOOST=/\*\*/ -DHAVE_PYTHON=\"2.7\" -DHAVE_BOOST_PYTHON=/\*\*/ -I. -I.. -I/lmb/home/pemsley/autobuild/Linux-lg19.lmb.internal-pre-release-gtk2-python/include -DPKGDATADIR='"/lmb/home/pemsley/autobuild/Linux-lg19.lmb.internal-pre-release-gtk2-python/share/coot"' -g -O -Wall -Wno-unused -MT coot-fasta.lo -MD -MP -MF .deps/coot-fasta.Tpo -c -o coot-fasta.lo coot-fasta.cc /bin/sh ../libtool --tag=CXX --mode=compile g++ -DPACKAGE_NAME=\"coot\" -DPACKAGE_TARNAME=\"coot\" -DPACKAGE_VERSION=\"0.8.8-pre\" -DPACKAGE_STRING=\"coot\ 0.8.8-pre\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"coot\" -DVERSION=\"0.8.8-pre\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 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"-DHAVE_BOOST=/**/" -DHAVE_PYTHON=\"2.7\" "-DHAVE_BOOST_PYTHON=/**/" -I. -I.. -I/lmb/home/pemsley/autobuild/Linux-lg19.lmb.internal-pre-release-gtk2-python/include -DPKGDATADIR=\"/lmb/home/pemsley/autobuild/Linux-lg19.lmb.internal-pre-release-gtk2-python/share/coot\" -g -O -Wall -Wno-unused -MT win-compat.lo -MD -MP -MF .deps/win-compat.Tpo -c win-compat.cc -o win-compat.o libtool: compile: g++ -DPACKAGE_NAME=\"coot\" -DPACKAGE_TARNAME=\"coot\" -DPACKAGE_VERSION=\"0.8.8-pre\" "-DPACKAGE_STRING=\"coot 0.8.8-pre\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"coot\" -DVERSION=\"0.8.8-pre\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_OPENMP=1 -DFFTW2_PREFIX_S=1 "-DHAVE_BOOST=/**/" -DHAVE_PYTHON=\"2.7\" "-DHAVE_BOOST_PYTHON=/**/" -I. -I.. -I/lmb/home/pemsley/autobuild/Linux-lg19.lmb.internal-pre-release-gtk2-python/include -DPKGDATADIR=\"/lmb/home/pemsley/autobuild/Linux-lg19.lmb.internal-pre-release-gtk2-python/share/coot\" -g -O -Wall -Wno-unused -MT coot-utils.lo -MD -MP -MF .deps/coot-utils.Tpo -c coot-utils.cc -o coot-utils.o libtool: compile: g++ -DPACKAGE_NAME=\"coot\" -DPACKAGE_TARNAME=\"coot\" -DPACKAGE_VERSION=\"0.8.8-pre\" "-DPACKAGE_STRING=\"coot 0.8.8-pre\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"coot\" -DVERSION=\"0.8.8-pre\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_OPENMP=1 -DFFTW2_PREFIX_S=1 "-DHAVE_BOOST=/**/" -DHAVE_PYTHON=\"2.7\" "-DHAVE_BOOST_PYTHON=/**/" -I. -I.. -I/lmb/home/pemsley/autobuild/Linux-lg19.lmb.internal-pre-release-gtk2-python/include 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.deps/dodec.Tpo -c dodec.cc -o dodec.o libtool: compile: g++ -DPACKAGE_NAME=\"coot\" -DPACKAGE_TARNAME=\"coot\" -DPACKAGE_VERSION=\"0.8.8-pre\" "-DPACKAGE_STRING=\"coot 0.8.8-pre\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"coot\" -DVERSION=\"0.8.8-pre\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_OPENMP=1 -DFFTW2_PREFIX_S=1 "-DHAVE_BOOST=/**/" -DHAVE_PYTHON=\"2.7\" "-DHAVE_BOOST_PYTHON=/**/" -I. -I.. -I/lmb/home/pemsley/autobuild/Linux-lg19.lmb.internal-pre-release-gtk2-python/include -DPKGDATADIR=\"/lmb/home/pemsley/autobuild/Linux-lg19.lmb.internal-pre-release-gtk2-python/share/coot\" -g -O -Wall -Wno-unused -MT gdk-keysyms.lo -MD -MP -MF .deps/gdk-keysyms.Tpo -c gdk-keysyms.cc -o gdk-keysyms.o mv -f .deps/win-compat.Tpo .deps/win-compat.Plo mv -f .deps/threads.Tpo .deps/threads.Plo mv -f .deps/hsv-rgb.Tpo .deps/hsv-rgb.Plo mv -f .deps/coot-fasta.Tpo .deps/coot-fasta.Plo mv -f .deps/atomic-numbers.Tpo .deps/atomic-numbers.Plo mv -f .deps/dodec.Tpo .deps/dodec.Plo mv -f .deps/coot-utils.Tpo .deps/coot-utils.Plo mv -f .deps/gdk-keysyms.Tpo .deps/gdk-keysyms.Plo /bin/sh ../libtool --tag=CXX --mode=link g++ -DPKGDATADIR='"/lmb/home/pemsley/autobuild/Linux-lg19.lmb.internal-pre-release-gtk2-python/share/coot"' -g -O -Wall -Wno-unused -o libcoot-utils.la -rpath /lmb/home/pemsley/autobuild/Linux-lg19.lmb.internal-pre-release-gtk2-python/lib coot-utils.lo coot-fasta.lo atomic-numbers.lo gdk-keysyms.lo hsv-rgb.lo dodec.lo win-compat.lo threads.lo make[1]: *** [libcoot-utils.la] Interrupt make: *** [all-recursive] Interrupt