{"id":8,"date":"2019-03-25T10:15:10","date_gmt":"2019-03-25T10:15:10","guid":{"rendered":"http:\/\/www2.mrc-lmb.cam.ac.uk\/groups\/bienz\/?page_id=8"},"modified":"2026-03-04T10:26:17","modified_gmt":"2026-03-04T10:26:17","slug":"silencers-limiting-hox-gene-expression","status":"publish","type":"page","link":"https:\/\/www2.mrc-lmb.cam.ac.uk\/groups\/bienz\/research-past-and-present\/silencers-limiting-hox-gene-expression\/","title":{"rendered":"Silencers limiting HOX gene expression in the\u00a0Drosophila\u00a0embryo"},"content":{"rendered":"\n<p>When I started my own group in 1986 at the University of Z\u00fcrich (Switzerland), I asked how developmental selector genes, such as the HOX genes&nbsp;<em>Ultrabithorax<\/em>,&nbsp;<em>Abdominal-B<\/em>&nbsp;and&nbsp;<em>labial<\/em>, are transcribed in response to positional information along the anteroposterior body axis of the embryo. Ultimately, this boils down to the question of how transcription factors bind to cis-acting control elements (transcriptional enhancers and silencers) to decode and respond to positional cues from within and outside cells. We used P-element transformation to insert reporters into the&nbsp;<em>Drosophila<\/em>&nbsp;genome comprising lacZ linked to short sections from the ~30kb upstream or ~45kb of intronic sequences of&nbsp;<em>Ultrabithorax<\/em>, as previous genetic analysis pointed to cis-acting control elements within these sequences. We thus discovered discrete segment-specific transcriptional enhancers that contain binding sites for positively-acting homeodomain proteins such as Fushi Tarazu and Even-skipped. We also identified silencers with binding sites for the Zn finger protein Hunchback, which acts in a hit-and-run fashion to promote recruitment of Polycomb complexes. Upon stable tethering to their cognate silencers, these complexes shut down&nbsp;<em>Ultrabithorax&nbsp;<\/em>permanently outside its normal realm of expression (e.g. at both ends of the anteroposterior body axis), whereby this OFF state is inherited throughout subsequent cell divisions.<\/p>\n\n\n\n<p>When I arrived&nbsp;at the MRC Laboratory of Molecular Biology (LMB)&nbsp;in Cambridge in 1991, I reduced my group to four members (for space reasons), and thus decided to wind down the silencing work. Instead, we focussed our efforts on the transcriptional regulation of&nbsp;<em>Ultrabithorax<\/em>&nbsp;and&nbsp;<em>labial<\/em>&nbsp;in the embryonic midgut in response to positional signalling (see next paragraph). However, the silencing work was pursued by one of my first students, J\u00fcrg M\u00fcller and his team (at the Max Plank Institute of Biochemistry in Munich, Germany).<\/p>\n\n\n\n<h3 class=\"wp-block-heading\">Image Gallery<\/h3>\n\n\n<style type=\"text\/css\">\n#foogallery-gallery-110.fg-justified .fg-item { margin-right: 20px; margin-bottom: 20px; }\n#foogallery-gallery-110.fg-justified .fg-image { height: 150px; }<\/style>\n\t\t\t<div class=\"foogallery foogallery-container foogallery-justified foogallery-lightbox-foobox fg-justified fg-ready fg-light fg-shadow-outline fg-loading-default fg-loaded-fade-in fg-caption-hover fg-hover-fade fg-hover-zoom\" id=\"foogallery-gallery-110\" data-foogallery=\"{&quot;item&quot;:{&quot;showCaptionTitle&quot;:true,&quot;showCaptionDescription&quot;:true},&quot;lazy&quot;:true,&quot;template&quot;:{&quot;rowHeight&quot;:150,&quot;maxRowHeight&quot;:225,&quot;margins&quot;:20,&quot;align&quot;:&quot;center&quot;,&quot;lastRow&quot;:&quot;smart&quot;}}\" style=\"--fg-title-line-clamp: 0; --fg-description-line-clamp: 0;\" >\n\t<div class=\"fg-item fg-type-image fg-idle\"><figure class=\"fg-item-inner\"><a href=\"https:\/\/www2.mrc-lmb.cam.ac.uk\/groups\/bienz\/wp-content\/uploads\/sites\/23\/Slide1.jpg\" data-caption-title=\"Hunchback initiates Polycomb-dependent silencing  in a hit-and-run fashion\" data-attachment-id=\"53\" data-type=\"image\" class=\"fg-thumb\"><span class=\"fg-image-wrap\"><img fetchpriority=\"high\" decoding=\"async\" alt=\"Hunchback initiates Polycomb-dependent silencing in a hit-and-run fashion\" title=\"Hunchback initiates Polycomb-dependent silencing  in a hit-and-run fashion\" height=\"225\" width=\"286\" class=\"skip-lazy fg-image\" data-src-fg=\"https:\/\/www2.mrc-lmb.cam.ac.uk\/groups\/bienz\/wp-content\/uploads\/sites\/23\/cache\/Slide1\/2831057070.jpg\" src=\"data:image\/svg+xml,%3Csvg%20xmlns%3D%22http%3A%2F%2Fwww.w3.org%2F2000%2Fsvg%22%20width%3D%22286%22%20height%3D%22225%22%20viewBox%3D%220%200%20286%20225%22%3E%3C%2Fsvg%3E\" loading=\"eager\"><\/span><span class=\"fg-image-overlay\"><\/span><\/a><figcaption class=\"fg-caption\"><div class=\"fg-caption-inner\"><div class=\"fg-caption-title\">Hunchback initiates Polycomb-dependent silencing  in a hit-and-run fashion<\/div><\/div><\/figcaption><\/figure><div class=\"fg-loader\"><\/div><\/div><div class=\"fg-item fg-type-image fg-idle\"><figure class=\"fg-item-inner\"><a href=\"https:\/\/www2.mrc-lmb.cam.ac.uk\/groups\/bienz\/wp-content\/uploads\/sites\/23\/Slide2.jpg\" data-caption-title=\"PBX and ABX are parasegment-specific remote enhancers of Ultrabithorax\" data-attachment-id=\"54\" data-type=\"image\" class=\"fg-thumb\"><span class=\"fg-image-wrap\"><img decoding=\"async\" alt=\"PBX and ABX are parasegment-specific remote enhancers of Ultrabithorax\" title=\"PBX and ABX are parasegment-specific remote enhancers of Ultrabithorax\" height=\"225\" width=\"296\" class=\"skip-lazy fg-image\" data-src-fg=\"https:\/\/www2.mrc-lmb.cam.ac.uk\/groups\/bienz\/wp-content\/uploads\/sites\/23\/cache\/Slide2\/1956703377.jpg\" src=\"data:image\/svg+xml,%3Csvg%20xmlns%3D%22http%3A%2F%2Fwww.w3.org%2F2000%2Fsvg%22%20width%3D%22296%22%20height%3D%22225%22%20viewBox%3D%220%200%20296%20225%22%3E%3C%2Fsvg%3E\" loading=\"eager\"><\/span><span class=\"fg-image-overlay\"><\/span><\/a><figcaption class=\"fg-caption\"><div class=\"fg-caption-inner\"><div class=\"fg-caption-title\">PBX and ABX are parasegment-specific remote enhancers of Ultrabithorax<\/div><\/div><\/figcaption><\/figure><div class=\"fg-loader\"><\/div><\/div><div class=\"fg-item fg-type-image fg-idle\"><figure class=\"fg-item-inner\"><a href=\"https:\/\/www2.mrc-lmb.cam.ac.uk\/groups\/bienz\/wp-content\/uploads\/sites\/23\/Slide3.jpg\" data-caption-title=\"Anterior limits conferred by the PBX and ABX Ultrabithorax enhancers\" data-attachment-id=\"55\" data-type=\"image\" class=\"fg-thumb\"><span class=\"fg-image-wrap\"><img decoding=\"async\" alt=\"Anterior limits conferred by the PBX and ABX Ultrabithorax enhancers\" title=\"Anterior limits conferred by the PBX and ABX Ultrabithorax enhancers\" height=\"225\" width=\"487\" class=\"skip-lazy fg-image\" data-src-fg=\"https:\/\/www2.mrc-lmb.cam.ac.uk\/groups\/bienz\/wp-content\/uploads\/sites\/23\/cache\/Slide3\/2773951051.jpg\" src=\"data:image\/svg+xml,%3Csvg%20xmlns%3D%22http%3A%2F%2Fwww.w3.org%2F2000%2Fsvg%22%20width%3D%22487%22%20height%3D%22225%22%20viewBox%3D%220%200%20487%20225%22%3E%3C%2Fsvg%3E\" loading=\"eager\"><\/span><span class=\"fg-image-overlay\"><\/span><\/a><figcaption class=\"fg-caption\"><div class=\"fg-caption-inner\"><div class=\"fg-caption-title\">Anterior limits conferred by the PBX and ABX Ultrabithorax enhancers<\/div><\/div><\/figcaption><\/figure><div class=\"fg-loader\"><\/div><\/div><div class=\"fg-item fg-type-image fg-idle\"><figure class=\"fg-item-inner\"><a href=\"https:\/\/www2.mrc-lmb.cam.ac.uk\/groups\/bienz\/wp-content\/uploads\/sites\/23\/Slide4.jpg\" data-caption-title=\"Polycomb-dependent silencing of Ultrabithorax BXD enhancer anterior to ps6 by Hunchback-binding sites\" data-attachment-id=\"56\" data-type=\"image\" class=\"fg-thumb\"><span class=\"fg-image-wrap\"><img decoding=\"async\" alt=\"Polycomb-dependent silencing of Ultrabithorax BXD enhancer anterior to ps6 by Hunchback-binding sites\" title=\"Polycomb-dependent silencing of Ultrabithorax BXD enhancer anterior to ps6 by Hunchback-binding sites\" height=\"225\" width=\"431\" class=\"skip-lazy fg-image\" data-src-fg=\"https:\/\/www2.mrc-lmb.cam.ac.uk\/groups\/bienz\/wp-content\/uploads\/sites\/23\/cache\/Slide4\/2289334686.jpg\" src=\"data:image\/svg+xml,%3Csvg%20xmlns%3D%22http%3A%2F%2Fwww.w3.org%2F2000%2Fsvg%22%20width%3D%22431%22%20height%3D%22225%22%20viewBox%3D%220%200%20431%20225%22%3E%3C%2Fsvg%3E\" loading=\"eager\"><\/span><span class=\"fg-image-overlay\"><\/span><\/a><figcaption class=\"fg-caption\"><div class=\"fg-caption-inner\"><div class=\"fg-caption-title\">Polycomb-dependent silencing of Ultrabithorax BXD enhancer anterior to ps6 by Hunchback-binding sites<\/div><\/div><\/figcaption><\/figure><div class=\"fg-loader\"><\/div><\/div><div class=\"fg-item fg-type-image fg-idle\"><figure class=\"fg-item-inner\"><a href=\"https:\/\/www2.mrc-lmb.cam.ac.uk\/groups\/bienz\/wp-content\/uploads\/sites\/23\/Slide5.jpg\" data-caption-title=\"A Polycomb response element in an imaginal disc enhancer of Ultrabithorax\" data-attachment-id=\"57\" data-type=\"image\" class=\"fg-thumb\"><span class=\"fg-image-wrap\"><img decoding=\"async\" alt=\"A Polycomb response element in an imaginal disc enhancer of Ultrabithorax\" title=\"A Polycomb response element in an imaginal disc enhancer of Ultrabithorax\" height=\"225\" width=\"441\" class=\"skip-lazy fg-image\" data-src-fg=\"https:\/\/www2.mrc-lmb.cam.ac.uk\/groups\/bienz\/wp-content\/uploads\/sites\/23\/cache\/Slide5\/1501804356.jpg\" src=\"data:image\/svg+xml,%3Csvg%20xmlns%3D%22http%3A%2F%2Fwww.w3.org%2F2000%2Fsvg%22%20width%3D%22441%22%20height%3D%22225%22%20viewBox%3D%220%200%20441%20225%22%3E%3C%2Fsvg%3E\" loading=\"eager\"><\/span><span class=\"fg-image-overlay\"><\/span><\/a><figcaption class=\"fg-caption\"><div class=\"fg-caption-inner\"><div class=\"fg-caption-title\">A Polycomb response element in an imaginal disc enhancer of Ultrabithorax<\/div><\/div><\/figcaption><\/figure><div class=\"fg-loader\"><\/div><\/div><div class=\"fg-item fg-type-image fg-idle\"><figure class=\"fg-item-inner\"><a href=\"https:\/\/www2.mrc-lmb.cam.ac.uk\/groups\/bienz\/wp-content\/uploads\/sites\/23\/Slide6.jpg\" data-caption-title=\"Hunchback-binding sites silence Fushi Tarazu enhancer activity anterior to ps6 to produce the PBX expression pattern\" data-attachment-id=\"58\" data-type=\"image\" class=\"fg-thumb\"><span class=\"fg-image-wrap\"><img decoding=\"async\" alt=\"Hunchback-binding sites silence Fushi Tarazu enhancer activity anterior to ps6 to produce the PBX expression pattern\" title=\"Hunchback-binding sites silence Fushi Tarazu enhancer activity anterior to ps6 to produce the PBX expression pattern\" height=\"225\" width=\"261\" class=\"skip-lazy fg-image\" data-src-fg=\"https:\/\/www2.mrc-lmb.cam.ac.uk\/groups\/bienz\/wp-content\/uploads\/sites\/23\/cache\/Slide6\/1869850971.jpg\" src=\"data:image\/svg+xml,%3Csvg%20xmlns%3D%22http%3A%2F%2Fwww.w3.org%2F2000%2Fsvg%22%20width%3D%22261%22%20height%3D%22225%22%20viewBox%3D%220%200%20261%20225%22%3E%3C%2Fsvg%3E\" loading=\"eager\"><\/span><span class=\"fg-image-overlay\"><\/span><\/a><figcaption class=\"fg-caption\"><div class=\"fg-caption-inner\"><div class=\"fg-caption-title\">Hunchback-binding sites silence Fushi Tarazu enhancer activity anterior to ps6 to produce the PBX expression pattern<\/div><\/div><\/figcaption><\/figure><div class=\"fg-loader\"><\/div><\/div><\/div>\n\n\n\n<div style=\"height:30px\" aria-hidden=\"true\" class=\"wp-block-spacer\"><\/div>\n\n\n\n<details class=\"wp-block-details is-layout-flow wp-block-details-is-layout-flow\"><summary>Relevant references:<\/summary>\t\t<div class=\"lmb-publications-update-me pubmed-feed\">\n\t\t\t<pre style=\"display:none;\">{\"pubid\":\"16453777,2903049,1972049,1683254,1680676,1687458,1352240,1354356,1356761,1485964,1362651,8096812,7893606,8763830,9836641\",\"showAllPapers\":true,\"showAllAuthors\":true,\"pubmedOrOrcid\":\"pubmed\",\"pubmedApiKey\":\"a06f23aba62c0b6ba4feaeb0317dde9a7509\",\"transientExpireTime\":86400,\"pageBlockId\":\"26bf9d5a-2279-4a91-a466-a8661ecb710a\",\"showYearWhere\":\"yearafter\",\"enablePagination\":false,\"authorFormat\":\"abbreviated\",\"sortOrder\":\"oldest\"}<\/pre>\n\t\t<\/div>\n\t\t<\/details>\n","protected":false},"excerpt":{"rendered":"<p>When I started my own group in 1986 at the University of Z\u00fcrich (Switzerland), I asked how developmental selector genes, such as the HOX genes&nbsp;Ultrabithorax,&nbsp;Abdominal-B&nbsp;and&nbsp;labial, are transcribed in response to positional information along the anteroposterior body axis of the embryo. Ultimately, this boils down to the question of how transcription factors bind to cis-acting control [&hellip;]<\/p>\n","protected":false},"author":1,"featured_media":0,"parent":138,"menu_order":0,"comment_status":"closed","ping_status":"closed","template":"","meta":{"_genesis_hide_title":false,"_genesis_hide_breadcrumbs":false,"_genesis_hide_singular_image":false,"_genesis_hide_footer_widgets":false,"_genesis_custom_body_class":"","_genesis_custom_post_class":"","_genesis_layout":"","footnotes":""},"class_list":{"0":"post-8","1":"page","2":"type-page","3":"status-publish","5":"entry"},"featured_image_src":null,"featured_image_src_square":null,"_links":{"self":[{"href":"https:\/\/www2.mrc-lmb.cam.ac.uk\/groups\/bienz\/wp-json\/wp\/v2\/pages\/8","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/www2.mrc-lmb.cam.ac.uk\/groups\/bienz\/wp-json\/wp\/v2\/pages"}],"about":[{"href":"https:\/\/www2.mrc-lmb.cam.ac.uk\/groups\/bienz\/wp-json\/wp\/v2\/types\/page"}],"author":[{"embeddable":true,"href":"https:\/\/www2.mrc-lmb.cam.ac.uk\/groups\/bienz\/wp-json\/wp\/v2\/users\/1"}],"replies":[{"embeddable":true,"href":"https:\/\/www2.mrc-lmb.cam.ac.uk\/groups\/bienz\/wp-json\/wp\/v2\/comments?post=8"}],"version-history":[{"count":48,"href":"https:\/\/www2.mrc-lmb.cam.ac.uk\/groups\/bienz\/wp-json\/wp\/v2\/pages\/8\/revisions"}],"predecessor-version":[{"id":497,"href":"https:\/\/www2.mrc-lmb.cam.ac.uk\/groups\/bienz\/wp-json\/wp\/v2\/pages\/8\/revisions\/497"}],"up":[{"embeddable":true,"href":"https:\/\/www2.mrc-lmb.cam.ac.uk\/groups\/bienz\/wp-json\/wp\/v2\/pages\/138"}],"wp:attachment":[{"href":"https:\/\/www2.mrc-lmb.cam.ac.uk\/groups\/bienz\/wp-json\/wp\/v2\/media?parent=8"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}