{"id":50,"date":"2017-06-08T14:59:47","date_gmt":"2017-06-08T13:59:47","guid":{"rendered":"http:\/\/www2.mrc-lmb.cam.ac.uk\/groups\/nagai\/?page_id=50"},"modified":"2019-09-14T17:35:55","modified_gmt":"2019-09-14T16:35:55","slug":"resources","status":"publish","type":"page","link":"https:\/\/www2.mrc-lmb.cam.ac.uk\/groups\/nagai\/resources\/","title":{"rendered":"Resources"},"content":{"rendered":"

Here are some PyMOL sessions from our latest structures.<\/p>\n

If you’ve never used PyMOL before, fear not! We have written a guide to using PyMOL to look at the spliceosome up close. You can download it here<\/a><\/p>\n

For PyMOL sessions for any cryoEM structure of the spliceosome, use the scripts at this GitHub repository<\/a>, maintained by Max Wilkinson.<\/p>\n

See also this repository<\/a> from Marcin Magnus.<\/p>\n

\r\n
\"A<\/a><\/div>\r\n
\r\n A complex PyMOL session<\/a>\r\n \r\n
\r\n Asession.pse
\r\n \r\n <\/div>\r\n
\r\n 16.8 MiB
\r\n 4088 Downloads
\r\n Details<\/a>\r\n <\/div>\r\n
\r\n \r\n \r\n \r\n \r\n
Platforms:<\/strong><\/td>Windows 8<\/td><\/tr>\r\n \r\n
Category:<\/strong><\/td>PyMOL<\/td><\/tr>\r\n \r\n
Date:<\/strong><\/td>16th July 2018<\/td><\/tr>\r\n <\/table>\r\n <\/div>\r\n
<\/div>\r\n<\/div>
\r\n
\"B<\/a><\/div>\r\n
\r\n B complex PyMOL session<\/a>\r\n \r\n
\r\n Bsession.pse
\r\n \r\n <\/div>\r\n
\r\n 31.2 MiB
\r\n 4173 Downloads
\r\n Details<\/a>\r\n <\/div>\r\n
\r\n \r\n \r\n \r\n \r\n
Platforms:<\/strong><\/td>Windows 8<\/td><\/tr>\r\n \r\n
Category:<\/strong><\/td>PyMOL<\/td><\/tr>\r\n \r\n
Date:<\/strong><\/td>14th November 2017<\/td><\/tr>\r\n <\/table>\r\n <\/div>\r\n
<\/div>\r\n<\/div>
\r\n
\"C<\/a><\/div>\r\n
\r\n C complex PyMOL session<\/a>\r\n \r\n
\r\n Csession.pse
\r\n \r\n <\/div>\r\n
\r\n 27.0 MiB
\r\n 4370 Downloads
\r\n Details<\/a>\r\n <\/div>\r\n
\r\n \r\n \r\n \r\n \r\n
Platforms:<\/strong><\/td>Windows 8<\/td><\/tr>\r\n \r\n
Category:<\/strong><\/td>PyMOL<\/td><\/tr>\r\n \r\n
Date:<\/strong><\/td>14th November 2017<\/td><\/tr>\r\n <\/table>\r\n <\/div>\r\n
<\/div>\r\n<\/div>
\r\n
\"C*<\/a><\/div>\r\n
\r\n C* complex PyMOL session<\/a>\r\n \r\n
\r\n Cstarsession.pse
\r\n \r\n <\/div>\r\n
\r\n 20.1 MiB
\r\n 4267 Downloads
\r\n Details<\/a>\r\n <\/div>\r\n
\r\n \r\n \r\n \r\n \r\n
Platforms:<\/strong><\/td>Windows 8<\/td><\/tr>\r\n \r\n
Category:<\/strong><\/td>PyMOL<\/td><\/tr>\r\n \r\n
Date:<\/strong><\/td>14th November 2017<\/td><\/tr>\r\n <\/table>\r\n <\/div>\r\n
<\/div>\r\n<\/div>
\r\n
\"Human<\/a><\/div>\r\n
\r\n Human P complex PyMOL session<\/a>\r\n \r\n
\r\n hPsession.pse
\r\n \r\n <\/div>\r\n
\r\n 35.6 MiB
\r\n 3724 Downloads
\r\n Details<\/a>\r\n <\/div>\r\n
\r\n \r\n \r\n \r\n \r\n
Platforms:<\/strong><\/td>Windows 8<\/td><\/tr>\r\n \r\n
Category:<\/strong><\/td>PyMOL<\/td><\/tr>\r\n \r\n
Date:<\/strong><\/td>1st February 2019<\/td><\/tr>\r\n <\/table>\r\n <\/div>\r\n
<\/div>\r\n<\/div>
\r\n
\"Human<\/a><\/div>\r\n
\r\n Human pre-B complex PyMOL session<\/a>\r\n \r\n
\r\n hpreBsession.pse
\r\n \r\n <\/div>\r\n
\r\n 45.4 MiB
\r\n 3614 Downloads
\r\n Details<\/a>\r\n <\/div>\r\n
\r\n \r\n \r\n \r\n \r\n
Platforms:<\/strong><\/td>Windows 8<\/td><\/tr>\r\n \r\n
Category:<\/strong><\/td>PyMOL<\/td><\/tr>\r\n \r\n
Date:<\/strong><\/td>16th April 2019<\/td><\/tr>\r\n <\/table>\r\n <\/div>\r\n
<\/div>\r\n<\/div>
\r\n
\"Human<\/a><\/div>\r\n
\r\n Human U5.U4\/U6 tri-snRNP PyMOL session<\/a>\r\n \r\n
\r\n htrisnRNPsession.pse
\r\n \r\n <\/div>\r\n
\r\n 28.6 MiB
\r\n 3634 Downloads
\r\n Details<\/a>\r\n <\/div>\r\n
\r\n \r\n \r\n \r\n \r\n
Platforms:<\/strong><\/td>Windows 8<\/td><\/tr>\r\n \r\n
Category:<\/strong><\/td>PyMOL<\/td><\/tr>\r\n \r\n
Date:<\/strong><\/td>16th April 2019<\/td><\/tr>\r\n <\/table>\r\n <\/div>\r\n
<\/div>\r\n<\/div>
\r\n
\"P<\/a><\/div>\r\n
\r\n P complex PyMOL session<\/a>\r\n \r\n
\r\n Psession.pse
\r\n \r\n <\/div>\r\n
\r\n 20.9 MiB
\r\n 4425 Downloads
\r\n Details<\/a>\r\n <\/div>\r\n
\r\n \r\n \r\n \r\n \r\n \r\n \r\n
Category:<\/strong><\/td>PyMOL<\/td><\/tr>\r\n \r\n
Date:<\/strong><\/td>17th November 2017<\/td><\/tr>\r\n <\/table>\r\n <\/div>\r\n
<\/div>\r\n<\/div>
\r\n
\"U5.U4\/U6<\/a><\/div>\r\n
\r\n U5.U4\/U6 tri-snRNP PyMOL session<\/a>\r\n \r\n
\r\n U4U6U5tri-snRNP.pse
\r\n \r\n <\/div>\r\n
\r\n 24.0 MiB
\r\n 4198 Downloads
\r\n Details<\/a>\r\n <\/div>\r\n
\r\n \r\n \r\n \r\n \r\n
Platforms:<\/strong><\/td>Windows 8<\/td><\/tr>\r\n \r\n
Category:<\/strong><\/td>PyMOL<\/td><\/tr>\r\n \r\n
Date:<\/strong><\/td>14th November 2017<\/td><\/tr>\r\n <\/table>\r\n <\/div>\r\n
<\/div>\r\n<\/div>\n","protected":false},"excerpt":{"rendered":"

Here are some PyMOL sessions from our latest structures. If you’ve never used PyMOL before, fear not! We have written a guide to using PyMOL to look at the spliceosome up close. You can download it For PyMOL sessions for any cryoEM structure of the spliceosome, use the scripts at this GitHub repository, maintained by […]<\/p>\n","protected":false},"author":11,"featured_media":0,"parent":0,"menu_order":0,"comment_status":"closed","ping_status":"closed","template":"","meta":{"_genesis_hide_title":false,"_genesis_hide_breadcrumbs":false,"_genesis_hide_singular_image":false,"_genesis_hide_footer_widgets":false,"_genesis_custom_body_class":"","_genesis_custom_post_class":"","_genesis_layout":"","footnotes":""},"class_list":{"0":"post-50","1":"page","2":"type-page","3":"status-publish","5":"entry"},"_links":{"self":[{"href":"https:\/\/www2.mrc-lmb.cam.ac.uk\/groups\/nagai\/wp-json\/wp\/v2\/pages\/50","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/www2.mrc-lmb.cam.ac.uk\/groups\/nagai\/wp-json\/wp\/v2\/pages"}],"about":[{"href":"https:\/\/www2.mrc-lmb.cam.ac.uk\/groups\/nagai\/wp-json\/wp\/v2\/types\/page"}],"author":[{"embeddable":true,"href":"https:\/\/www2.mrc-lmb.cam.ac.uk\/groups\/nagai\/wp-json\/wp\/v2\/users\/11"}],"replies":[{"embeddable":true,"href":"https:\/\/www2.mrc-lmb.cam.ac.uk\/groups\/nagai\/wp-json\/wp\/v2\/comments?post=50"}],"version-history":[{"count":9,"href":"https:\/\/www2.mrc-lmb.cam.ac.uk\/groups\/nagai\/wp-json\/wp\/v2\/pages\/50\/revisions"}],"predecessor-version":[{"id":292,"href":"https:\/\/www2.mrc-lmb.cam.ac.uk\/groups\/nagai\/wp-json\/wp\/v2\/pages\/50\/revisions\/292"}],"wp:attachment":[{"href":"https:\/\/www2.mrc-lmb.cam.ac.uk\/groups\/nagai\/wp-json\/wp\/v2\/media?parent=50"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}