Analyse results: Difference between revisions
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= Output files = | = Output files = | ||
For every iteration, RELION will output the following files: | For every iteration, RELION will output the following files: | ||
# <code>rootname_it000???_class000???.mrc</code> | # <code>rootname_it000???_class000???.mrc</code> (or <code>rootname_it000???_class000???.mrcs</code> for 2D refinements) | ||
# <code>rootname_it000???_optimiser.star</code> | # <code>rootname_it000???_optimiser.star</code> | ||
# <code>rootname_it000???_mlmodel.star</code> | # <code>rootname_it000???_mlmodel.star</code> | ||
Revision as of 17:25, 4 October 2011
Output files
For every iteration, RELION will output the following files:
rootname_it000???_class000???.mrc(orrootname_it000???_class000???.mrcsfor 2D refinements)rootname_it000???_optimiser.starrootname_it000???_mlmodel.starrootname_it000???_data.star
++ or rootname_it000???_class000???.mrcs for 2D refinements.
These files contain the following information, respectively:
- The images of the refined 2D/3D structures.
- General information about the optimisation process.
- Information about the refined model parameters apart from the images (e.g. the noise spectra, the spherical average of the signal-to-noise ratios in the reconstructed structures, the angular distributions, etc.
- For each of the individual experimental images: information about their CTF, optimal orientation, translation and class assignment, normalisation correction, height of the (normalised) probability distribution, etc .