Coot Scripting Interface
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Coot Scripting Interface - Refinement utilities. More...
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Functions | |
More Refinement Functions | |
void | use_unimodal_ring_torsion_restraints (const std::string &res_name) |
use unimodal ring torsion restraints (e.g. for carbohydrate pyranose) | |
void | use_unimodal_ring_torsion_restraints_for_residue (const std::string &res_name, PyObject *torsions_info_list) |
use unimodal ring torsion restraints (e.g. for carbohydrate pyranose) | |
void | set_refinement_geman_mcclure_alpha (float alpha) |
set the Geman-McClure distance alpha value (weight) | |
float | get_refinement_geman_mcclure_alpha () |
get the Geman-McClure distance alpha value (weight) | |
void | set_refinement_lennard_jones_epsilon (float epsilon) |
set the Lennard Jones epsilon parameter | |
void | set_log_cosh_target_distance_scale_factor (float sf) |
set the log cosh scale factor for target position restraints | |
void | crankshaft_peptide_rotation_optimization_scm (int imol, SCM residue_spec_smc) |
Apply crankshaft peptide rotation optimization to the specified residue. | |
void | crankshaft_peptide_rotation_optimization_py (int imol, PyObject *residue_spec_py) |
Apply crankshaft peptide rotation optimization to the specified residue. | |
void | convert_dictionary_planes_to_improper_dihedrals () |
Coot Scripting Interface - Refinement utilities.