RELION (for REgularised LIkelihood OptimisatioN, pronounce rely-on) is a stand-alone computer program that employs an empirical Bayesian approach to refinement of (multiple) 3D reconstructions or 2D class averages in electron cryo-microscopy (cryo-EM). It is developed in the group of Sjors Scheres at the MRC Laboratory of Molecular Biology. Briefly, the ill-posed problem of 3D-reconstruction is regularised by incorporating prior knowledge: the fact that macromolecular structures are smooth, i.e. they have limited power in the Fourier domain. In the corresponding Bayesian framework, many parameters of a statistical model are learned from the data, which leads to objective and high-quality results without the need for user expertise. The underlying theory is given in Scheres (2012) JMB. A more detailed description of its implementation is given in Scheres (2012) JSB. If RELION is useful in your work, please cite at least one of these papers.
For examples of how we (and some others) have used RELION, and for a complete of publications about it, please see our web site.
- Download & install (also see the list of Known_issues and the Release notes)
- Conventions & File formats
- Tutorial (1.3) (2.0) (The quickest way to learning RELION)
- Recommended procedures (how we use RELION)
- Benchmarks & computer hardware
- FAQs (for useful tricks and in case of trouble)
If you have a question, please check the FAQs and whether the topic has been addressed already on the CCP-EM mailing list. If not, use the CCP-EM list to send us your message. Please, do not send us direct e-mails with general questions about RELION.