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Home > Visualizing cellular proteostasis
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Juliette Fedry

Visualizing cellular proteostasis

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Each cell relies on thousands of internal biochemical reactions, carried out by around ten thousand different types of proteins. These cellular proteins, collectively known as the proteome, must be synthesized in precise quantities, undergo correct folding, and be accurately localized within the cell. The process that ensures proper protein homeostasis in cells is referred to as "proteostasis." It involves a sophisticated network of molecular machineries responsible for producing appropriately folded and assembled proteins and ensuring their timely availability at specific cellular sites.

The constituents of this proteostasis network include the ribosome, which synthesizes new proteins, chaperones that guide nascent proteins to fold and degradation factors that remove misfolded or damaged proteins. Perturbations in these processes can result in the accumulation of misfolded proteins that are detrimental to cellular function. Proteostasis dysregulation notably occurs during aging and is prevalent in a wide range of diseases including neurodegeneration, cancer and metabolic diseases.

The goal of our research is to understand how the proteostasis network is organised in different types of cells, how it changes during different physiologic conditions, and how it goes awry during stress and other pathologic states. We employ an advanced combination of cell biology, light microscopy, cryo-electron microscopy (cryo-EM), cryo-electron tomography (cryo-ET) and computational analysis. Current projects in the lab include the investigation of translational regulation in specific cellular conditions, analysis of proteostasis re-wiring during stress, as well as related method development aspects. The specific PhD project will be developed to meet the student’s interests, goals, and skills.

References

Visualization of translation reorganization upon persistent ribosome collision stress in mammalian cells
Fedry J, Silva J, Vanevic M, Fronik S, Mechulam Y, Schmitt E, des Georges A, Faller WJ, Förster F
Molecular Cell 84(6): 1078-1089.e4 (2024)
 
Visualization of translation and protein biogenesis at the ER membrane
Gemmer M, Chaillet ML, van Loenhout J, Cuevas Arenas R, Vismpas D, Gröllers-Mulderij M, Koh FA, Albanese P, Scheltema RA, Howes SC, Kotecha A, Fedry J, Förster F
Nature 614(7946): 160-167 (2023)
 
TMX4-driven LINC complex disassembly and asymmetric autophagy of the nuclear envelope upon acute ER stress
Kucińska MK, Fedry J, Galli C, Morone D, Raimondi A, Soldà T, Förster F, Molinari M
Nature Communications 14(1): (2023)

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